BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013F02LP1|AL426551
(319 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1592 629 0.0
>3x_Contig1592
Length = 12307
Score = 629 bits (316), Expect = 0.0
Identities = 317/318 (99%)
Strand = Plus / Plus
Query: 1 gatcaataaatatataccgcttacagcagaaatagaagaaaggaggatgcctaccagtgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 gatcaataaatatataccgcttacagcagaaatagaagaaaggaggatgcctaccagtgt 650
Query: 61 tcaggtgaaagattactatgaaaatgattacaatgggttatggtcatggtatttgagcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 tcaggtgaaagattactatgaaaatgattacaatgggttatggtcatggtatttgagcaa 710
Query: 121 tttacgaaacggagagtttgaagaattgactggtaacgagttgaagcatggacttttgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 tttacgaaacggagagtttgaagaattgactggtaacgagttgaagcatggacttttgaa 770
Query: 181 acggtttctcagagatcagtttcaagcgaccggaccattaaacaaaaaattamtcttggt 240
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 771 acggtttctcagagatcagtttcaagcgaccggaccattaaacaaaaaattactcttggt 830
Query: 241 ttcaattccggatgagattcaccaggatattaaagtattagaagagtttttaagcgaata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 831 ttcaattccggatgagattcaccaggatattaaagtattagaagagtttttaagcgaata 890
Query: 301 tttccatttgaaagatga 318
||||||||||||||||||
Sbjct: 891 tttccatttgaaagatga 908
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3046
Number of Sequences: 1807
Number of extensions: 3046
Number of successful extensions: 62
Number of sequences better than 1.0e-20: 1
length of query: 319
length of database: 10,358,551
effective HSP length: 16
effective length of query: 303
effective length of database: 10,329,639
effective search space: 3129880617
effective search space used: 3129880617
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 49 (98.0 bits)